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Pipeline Filters
Pipelines on the platform are tightly connected with the projects. The Data type field in the pro...
UPLOAD ANNOTATIONS
Pathways, gene ontology (GO) terms, ABR genes, and VEP (Variant Effect Predictor) files are class...
UPLOAD REFERENCES
The latest versions of reference genomes and transcriptomes are available on the platform for eig...
UPLOAD SEQUENCE DATA
Sequencing files can be uploaded through the SEQUENCE DATA (Fig. 1) tab. Complete all the fields ...
Pipeline Library
A pipeline is defined as a set of computational tools, which run either sequentially or parallell...
Metadata
Click the Metadata tab after clicking the icon to access the Metadata window (Fig.). The Metadat...
Annotations
Click the Annotations tab after clicking the icon to access the Annotations window (Fig.). The ...
References
Click the References tab after clicking the icon to access the References window (Fig. 1). The Re...
Overview
Data upload is the first step in the analysis. Generally, four data types are required: S...
Execution of Stanome Apps
Click (Fig. 2) from any App to open the execution dialog box. Execution requirements vary for eac...
Jobs in Stanome Apps
App execution results are displayed similar to the jobs list window in a project and can be acces...