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Step 1 : Upload samples and other required files through "Uploader". Each file will go through th...

Inputs: Parameters Running the App: explain the detais with figures

Data output: Provide explanations Data access: How can the data be downloaded

Adding a New OrganismClick on settings icon from the right upper corner. Select  from the left ...

De novo pipeline building requires bioinformatics expertise. Please contact the technical support...

Sequence Data stores the sequencing data files uploaded by the users and displays them in reverse...

Who can use the Stanome platform? Anyone who has NGS data to be analyzed can take advantage of ...

Annotations: Data describing the gene models, pathways, ontologies, and other relevant biological...

Once a pipeline is successfully created and validated within a project, it's ready for execution....

A new pipeline can be created by copying an existing pipeline from other projects or a pre-config...

Variant calling pipelines contains two exclusive sections.   Mapping This section provides deta...

Each pipeline execution generates an HTML report. The final report and other files can be accesse...

Completed or unfinished pipeline runs are listed in the jobs table on the Jobs window (Fig. 1). ...

A new project can be created in two ways.  From the Dashboard window - click the icon From the ...

Sample Set is a group of sequence files that belong to an experiment and can be analyzed together...

Any files associated with an experiment (excluding sequencing files, references, and annotations)...

This report contains three exclusive sections.  Mapping (Salmon/Kallisto):  This section provid...

Pipelines, from any project, can be added or deleted from the favorites by clicking the icon nex...

The new pipeline creation window is accessed from two locations. Either click on the project win...

My Pipelines show the list of pipelines within a project. Pipelines can be created, viewed, edite...