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Kshama
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Frequently Asked Questions
Who can use the Stanome platform? Anyone who has NGS data to be analyzed can take advantage of ...
Transcript Report
This report contains three exclusive sections. Mapping (Salmon/Kallisto): This section provid...
Variant Report
Variant calling pipelines contains two exclusive sections. Mapping This section provides deta...
Overview
Each pipeline execution generates an HTML report. The final report and other files can be accesse...
Jobs
Completed or unfinished pipeline runs are listed in the jobs table on the Jobs window (Fig. 1). ...
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PROJECT MANAGEMENT
Self-contained mini-workspaces, where sample sets can be analyzed independently without interfere...
Uploader
Data upload is the first step in the analysis. Uploader is used to upload different data types on...
Pipeline Library
Stanome provides a list of pre-configured pipelines evaluated against the model organisms in the ...
Data Store
Data Store represents four different data types, i.e. Sequence Data, References, Annotations, and...
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